Tuberculosis Database

Quick Links

Feature Search: Search for features by type. Filter on an additional text query if desired.
Gene Expression Publications: Search and browse publications with gene expression data that are stored in TBDB.
Gene Expression Samples and Conditions: Search for a gene over all published samples and explore the expression significance of the indicated gene.
Expression Profiles: Search for a gene in the published data sets. You will be able to explore the gene expression of the indicated gene in each publication.
My Repository (sign in required): Access your saved microarray data sets for further analysis.
BLAST - search all genomes by sequencing similarity
Genes - Gene annotations by functional categories
Download - download data files for sequence and annotation

Gene Expression Samples and Conditions

Search for a gene over all published data sets. You will be able to explore the expression significants of the indicated gene.

Search for a Gene:

A valid search term is an RV identifier or a gene symbol. The '*' wild card character may be used. GO terms such as 'kinase' may also be used. If the search term yields more than one gene, an intermediate list will be generated and a selection may be made from the list.

Gene Expression Samples and Conditions is a tool that helps you select samples from the database for a selected gene (e.g. cobS), based on the significance of expression values. This tool can also be accessed from a Quick Search results page (e.g. RV2429) or directly from a Gene Detail page (e.g. RV2429). For more details please refer to help document and/or a tutorial page to get you started in exploring TBDB with this new tool.